Biotia
David C. Danko
Author

David C. Danko, PhD

Chief Technology Officer
Areas of expertise

Bioinformatics • Metagenomics • NGS pipeline design • Software engineering • Environmental microbiomes • Computational biology • Machine learning • Spaceflight microbiology

David C. Danko, PhD, is the Chief Technology Officer of Biotia, where he leads software engineering and the design of computational pipelines that turn next-generation sequencing data into actionable microbial diagnostic insights.

About

About David C. Danko

David C. Danko, PhD, is the Chief Technology Officer of Biotia, where he leads the software engineering team and designs end-to-end computational pipelines for extracting microbial diagnostic insights from next-generation sequencing data. He oversees the technical architecture behind Biotia's clinical metagenomic assays, BIOTIA-DX, BIOTIA-ID, and the GeoSeeq global outbreak surveillance platform.

David C. Danko earned his PhD in computational biology from Weill Cornell Medicine, where he studied the impact of environmental microbiomes on human health, and his undergraduate degree in computer science from the Massachusetts Institute of Technology. During his graduate work he also studied at the Oxford Kennedy Institute of Rheumatology. His research has focused on understanding immune responses to environmental microbes and characterizing how microbiomes change during human spaceflight.

He is a contributor to MetaSUB, an international consortium that has identified thousands of previously unknown bacterial and viral species from urban transit systems and hospitals across more than 60 cities in 32 countries. His work bridges machine learning, software engineering, and microbial genomics, and continues to inform Biotia's approach to scalable, AI-driven infectious disease diagnostics.

Credentials & education

Education

  • PhD in Computational Biology and Medicine, Weill Cornell Graduate School of Medical Sciences, 2021
  • BS in Computational Biology, Massachusetts Institute of Technology, 2015
Affiliations & societies

Affiliations

  • Weill Cornell Medicine (alumnus)
  • Massachusetts Institute of Technology (alumnus)
  • Oxford Kennedy Institute of Rheumatology (former visiting student)
  • MetaSUB International Consortium (contributor)
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Publications and Blogs from David C. Danko

Selected publications

PUBLICATION

A global metagenomic map of urban microbiomes and antimicrobial resistance (MetaSUB), Cell, 2021

PUBLICATION

The Microbe Directory v2.0: An Expanded Database of Ecological and Phenotypical Features of Microbes (2019), bioRxiv

PUBLICATION

Genetic and Immunological Evidence for Microbial Transfer Between the International Space Station and an Astronaut (2020), bioRxiv

Blog posts